Difference between revisions of "Benchmarking: NAMD 2.10"

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Line 9: Line 9:
 
  cd NAMD_2.10_Source
 
  cd NAMD_2.10_Source
 
  tar xf charm-6.6.1.tar
 
  tar xf charm-6.6.1.tar
 +
 
# Build and test the Charm++/Converse library (multicore version):
 
# Build and test the Charm++/Converse library (multicore version):
  cd charm-6.6.1
+
cd charm-6.6.1
  ./build charm++ multicore-linux64 --with-production
+
./build charm++ multicore-linux64 --with-production
  cd multicore-linux64/tests/charm++/megatest
+
cd multicore-linux64/tests/charm++/megatest
  make pgm
+
make pgm
  ./pgm +p4  (multicore does not support multiple nodes)
+
./pgm +p4  (multicore does not support multiple nodes)
  cd ../../../../..
+
cd ../../../../..

Revision as of 17:24, 7 January 2015

Download NAMD 2.10

Download NAMD 2.10 source code or prebuilt binaries from: http://www.ks.uiuc.edu/Development/Download/download.cgi?PackageName=NAMD

Build from source

  1. Unpack NAMD and matching Charm++ source code:
tar xzf NAMD_2.10_Source.tar.gz
cd NAMD_2.10_Source
tar xf charm-6.6.1.tar
  1. Build and test the Charm++/Converse library (multicore version):
cd charm-6.6.1
./build charm++ multicore-linux64 --with-production
cd multicore-linux64/tests/charm++/megatest
make pgm
./pgm +p4   (multicore does not support multiple nodes)
cd ../../../../..