Difference between revisions of "Benchmarking: AMBER 12"

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Line 12: Line 12:
 
export CC=icc</syntaxhighlight>
 
export CC=icc</syntaxhighlight>
 
==Build==
 
==Build==
===Serial Version===
+
=Serial Version=
 
<syntaxhighlight>./configure -noX11 intel
 
<syntaxhighlight>./configure -noX11 intel
 
make install</syntaxhighlight>
 
make install</syntaxhighlight>
===Single GPU Version===
+
=Single GPU Version=
 
<syntaxhighlight>export CUDA_HOME=/shared/apps/cuda/cuda-5.0
 
<syntaxhighlight>export CUDA_HOME=/shared/apps/cuda/cuda-5.0
 
./configure -noX11 -cuda intel</syntaxhighlight>
 
./configure -noX11 -cuda intel</syntaxhighlight>
===Multi GPU Version===
+
=Multi GPU Version=
 
<syntaxhighlight>module load mvapich2/1.8.1-intel-compilers
 
<syntaxhighlight>module load mvapich2/1.8.1-intel-compilers
 
./configure -noX11 -cuda -mpi intel</syntaxhighlight>
 
./configure -noX11 -cuda -mpi intel</syntaxhighlight>

Revision as of 10:37, 7 March 2013

Requirements

  1. Cuda 5.0
  2. Intel Compilers

Build Environment

module load intel/compilers/13.0.1

export AMBERHOME=`pwd`

export CXX=icpc
export FC=ifort
export F90=ifort
export CC=icc

Build

Serial Version

./configure -noX11 intel
make install

Single GPU Version

export CUDA_HOME=/shared/apps/cuda/cuda-5.0
./configure -noX11 -cuda intel

Multi GPU Version

module load mvapich2/1.8.1-intel-compilers
./configure -noX11 -cuda -mpi intel